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yfeK protein (Idiomarina loihiensis) - STRING interaction network
"yfeK" - Dyp-type peroxidase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfeKDyp-type peroxidase (321 aa)    
Predicted Functional Partners:
IL0469
Hypothetical protein (592 aa)
              0.645
pheA
Prephenate dehydratase (273 aa)
       
    0.556
IL0852
Hypothetical protein (103 aa)
   
          0.522
tyrA
Chorismate mutase-T (380 aa)
         
  0.449
tatC
Sec-independent protein secretion pathway component TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides (244 aa)
         
  0.431
IL0111
High-affinity Fe2+/Pb2+ permease (633 aa)
         
  0.428
katE
Catalase-like protein; Has an organic peroxide-dependent peroxidase activity (326 aa)
 
   
  0.409
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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