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IL0482 protein (Idiomarina loihiensis) - STRING interaction network
"IL0482" - Na+ ABC transporter permease in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0482Na+ ABC transporter permease (381 aa)    
Predicted Functional Partners:
IL0481
ABC-type Na+ transport system, ATPase (244 aa)
 
   
  0.999
IL0480
Peptidase (481 aa)
 
          0.979
IL0274
ABC-type Na+ efflux pump, ATPase (314 aa)
       
  0.766
IL2145
Hypothetical protein (294 aa)
   
          0.714
IL1521
Hypothetical protein (365 aa)
   
          0.704
IL0479
Hypothetical protein (124 aa)
 
          0.686
IL0909
Hypothetical protein (407 aa)
   
          0.670
IL0859
SmpA /OmlA family lipoprotein (128 aa)
   
          0.613
IL1854
Hypothetical protein (432 aa)
 
          0.603
IL1913
Hypothetical protein (470 aa)
   
          0.599
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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