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gsk protein (Idiomarina loihiensis) - STRING interaction network
"gsk" - Ribokinase sugar kinase in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gskRibokinase sugar kinase (336 aa)    
Predicted Functional Partners:
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (459 aa)
 
 
  0.895
gatY
Fructose-1,6-bisphosphate aldolase (354 aa)
 
  0.778
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Adenosine deaminase (410 aa)
     
  0.760
fabG
3-oxoacyl-ACP reductase (245 aa)
   
 
  0.741
IL0792
Acetoin(diacetyl) reductase (259 aa)
   
 
  0.741
IL0544
3-oxoacyl-ACP reductase (241 aa)
   
 
  0.741
IL0484
Acetyltransferase (189 aa)
              0.697
cbiB
Cobalamin biosynthesis membrane protein (318 aa)
              0.692
IL0488
Hypothetical protein (183 aa)
     
      0.683
tadA
Cytosine/adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) (150 aa)
       
    0.624
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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