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cbiB protein (Idiomarina loihiensis) - STRING interaction network
"cbiB" - Cobalamin biosynthesis membrane protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiBCobalamin biosynthesis membrane protein (318 aa)    
Predicted Functional Partners:
IL0488
Hypothetical protein (183 aa)
              0.777
hisC2
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase (357 aa)
   
 
  0.749
hisC1
Histidinol-phosphate aminotransferase (367 aa)
   
 
  0.749
gsk
Ribokinase sugar kinase (336 aa)
              0.692
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (459 aa)
              0.568
IL0484
Acetyltransferase (189 aa)
              0.568
folE2
GTP cyclohydrolase; Converts GTP to 7,8-dihydroneopterin triphosphate (308 aa)
         
  0.554
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (313 aa)
 
        0.544
hemB
Delta-aminolevulinic acid dehydratase (335 aa)
 
          0.497
hemL
Glutamate-1-semialdehyde aminotransferase (427 aa)
 
          0.495
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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