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IL0494 protein (Idiomarina loihiensis) - STRING interaction network
"IL0494" - Hypothetical protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0494Hypothetical protein (568 aa)    
Predicted Functional Partners:
rsmC
16S RNA G1207 methylase RsmC; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle (334 aa)
              0.812
cheX
Chemotaxis protein CheX (156 aa)
   
          0.726
motB
Flagellar motor protein (312 aa)
 
          0.677
IL0496
aminoacylase-2/carboxypeptidase-Z family hydrolase (340 aa)
              0.627
IL0498
Aspartyl protease (140 aa)
              0.627
rimK
30S ribosomal protein S6 (301 aa)
              0.627
IL0495
Signal transduction protein (118 aa)
              0.627
IL1711
Hypothetical protein (252 aa)
   
          0.622
IL0492
Signal transduction histidine kinase (539 aa)
 
          0.619
motA
Flagellar motor component (255 aa)
 
          0.579
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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