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IL0498 protein (Idiomarina loihiensis) - STRING interaction network
"IL0498" - Aspartyl protease in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0498Aspartyl protease (140 aa)    
Predicted Functional Partners:
rimK
30S ribosomal protein S6 (301 aa)
          0.997
IL0496
aminoacylase-2/carboxypeptidase-Z family hydrolase (340 aa)
 
          0.970
IL0495
Signal transduction protein (118 aa)
              0.859
IL0494
Hypothetical protein (568 aa)
              0.627
IL0498.1
Il-IS_1, transposase (343 aa)
              0.598
rsmC
16S RNA G1207 methylase RsmC; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle (334 aa)
              0.593
IL2160
Fused RimK-like domain/uncharacterized domain-containing protein (486 aa)
 
          0.520
hisF
Imidazoleglycerol-phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit (265 aa)
       
    0.463
IL0492
Signal transduction histidine kinase (539 aa)
              0.427
IL0085
Hypothetical protein (96 aa)
   
          0.422
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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