STRINGSTRING
IL0500 protein (Idiomarina loihiensis) - STRING interaction network
"IL0500" - Signal protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0500Signal protein (244 aa)    
Predicted Functional Partners:
IL2414
Intracellular signaling protein (299 aa)
 
          0.871
IL1544
Signal protein (300 aa)
 
          0.867
gltB
Glutamate synthase subunit alpha (1488 aa)
   
 
  0.856
IL2168
Signaling protein (562 aa)
   
 
 
  0.804
IL2065
Hypothetical protein (290 aa)
 
  0.802
IL0298
Signal protein (400 aa)
 
          0.793
IL1741
TPR repeat- and GGDEF domain-containing signaling protein (605 aa)
 
  0.793
IL1090
Signal protein (476 aa)
 
          0.790
IL1686
Signal protein (301 aa)
 
          0.787
IL2535
Intracellular signaling protein (369 aa)
 
          0.782
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (10%) [HD]