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IL0501 protein (Idiomarina loihiensis) - STRING interaction network
"IL0501" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0501Hypothetical protein (220 aa)    
Predicted Functional Partners:
mutH
DNA mismatch repair protein; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair (224 aa)
 
          0.794
IL2278
Hypothetical protein (106 aa)
   
          0.775
pulN
Type II secretory pathway, component PulN (248 aa)
   
          0.762
IL2320
HD superfamily hydrolase (390 aa)
   
          0.759
IL1285
Hypothetical protein (581 aa)
   
          0.757
IL1711
Hypothetical protein (252 aa)
   
          0.752
IL0715
Hypothetical protein (146 aa)
   
          0.749
IL1875
Hypothetical protein (834 aa)
   
          0.748
IL1692
Hypothetical protein (406 aa)
   
          0.736
copD
Copper export protein (281 aa)
   
          0.720
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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