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IL0511 protein (Idiomarina loihiensis) - STRING interaction network
"IL0511" - PAS domain-containing protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0511PAS domain-containing protein (139 aa)    
Predicted Functional Partners:
IL0510
Chemotaxis response regulator (340 aa)
 
          0.970
IL0512
Molybdopterin/thiamine biosynthesis family protein (263 aa)
              0.859
IL1111
Chemotaxis protein CheW (285 aa)
   
          0.764
IL1154
Hypothetical protein (387 aa)
   
          0.745
IL1194
Flagellar basal body protein FliL (180 aa)
   
          0.665
IL1153
Hypothetical protein (159 aa)
   
          0.613
IL1722
DnaJ-like protein (200 aa)
   
          0.611
IL0266
Flagellar basal body protein FliL (132 aa)
   
          0.605
IL0363
Type II secretory pathway component (303 aa)
   
          0.598
mshO
Tfp-like pilus assembly protein (272 aa)
   
          0.579
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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