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nhaR protein (Idiomarina loihiensis) - STRING interaction network
"nhaR" - LysR family transcriptional regulator in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhaRLysR family transcriptional regulator (288 aa)    
Predicted Functional Partners:
IL0525
Hypothetical protein (757 aa)
 
          0.942
IL0524
NADH dehydrogenase subunit L (441 aa)
 
     
  0.929
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (102 aa)
     
      0.763
IL2491
LysR family transcriptional regulator (285 aa)
   
          0.665
IL1254
LysR family transcriptional regulator (281 aa)
   
          0.665
IL0526
Hypothetical protein (65 aa)
              0.631
IL0627
LysR family transcriptional regulator (290 aa)
   
          0.612
IL2095
LysR family transcriptional regulator (280 aa)
   
        0.522
rhaR
rhaRS operon positive regulator (343 aa)
     
        0.503
gltB
Glutamate synthase subunit alpha (1488 aa)
 
     
  0.499
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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