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IL0539 protein (Idiomarina loihiensis) - STRING interaction network
"IL0539" - Chain length determinant protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0539Chain length determinant protein (336 aa)    
Predicted Functional Partners:
IL0565
Polysaccharide biosynthesis/export protein (920 aa)
 
          0.860
ugd
UDP-glucose 6-dehydrogenase (388 aa)
              0.817
IL1054
Hypothetical protein (436 aa)
 
          0.730
IL0540
Multidrug ABC transporter ATPase and permease (598 aa)
              0.655
rffH
DTDP-glucose pyrophosphorylase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis (292 aa)
              0.643
rffG
DTDP-D-glucose 4,6-dehydratase (352 aa)
              0.641
IL2113
Porin (323 aa)
   
          0.601
IL2345
Hypothetical protein (167 aa)
   
          0.508
IL2326
Hypothetical protein (73 aa)
   
          0.456
IL1521
Hypothetical protein (365 aa)
   
          0.440
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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