STRINGSTRING
IL0548 protein (Idiomarina loihiensis) - STRING interaction network
"IL0548" - Nucleoside-diphosphate sugar epimerase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0548Nucleoside-diphosphate sugar epimerase (396 aa)    
Predicted Functional Partners:
IL0549
Pyridoxal phosphate-dependent enzyme (380 aa)
 
 
  0.994
wecE
TDP-4-oxo-6-deoxy-D-glucose transaminase (380 aa)
   
 
  0.978
IL0553
Nucleoside-diphosphate-sugar pyrophosphorylase (351 aa)
 
   
    0.973
IL0550
UDP-N-acetylglucosamine 2-epimerase (387 aa)
 
   
  0.945
IL0551
Sialic acid synthase (357 aa)
 
     
  0.923
IL0552
Acetyltransferase (213 aa)
 
   
  0.923
IL0547
Acetyltransferase (173 aa)
   
   
  0.902
IL0554
CMP-N-acetylneuraminic acid synthetase (236 aa)
         
  0.888
rffH
DTDP-glucose pyrophosphorylase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis (292 aa)
       
  0.871
IL0543
Acetyltransferase (185 aa)
   
   
  0.844
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (7%) [HD]