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IL0553 protein (Idiomarina loihiensis) - STRING interaction network
"IL0553" - Nucleoside-diphosphate-sugar pyrophosphorylase in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0553Nucleoside-diphosphate-sugar pyrophosphorylase (351 aa)    
Predicted Functional Partners:
IL0550
UDP-N-acetylglucosamine 2-epimerase (387 aa)
 
   
  0.982
IL0549
Pyridoxal phosphate-dependent enzyme (380 aa)
 
   
  0.980
IL0552
Acetyltransferase (213 aa)
 
   
  0.975
IL0548
Nucleoside-diphosphate sugar epimerase (396 aa)
 
   
    0.973
IL0551
Sialic acid synthase (357 aa)
 
        0.973
IL0554
CMP-N-acetylneuraminic acid synthetase (236 aa)
 
        0.928
wecE
TDP-4-oxo-6-deoxy-D-glucose transaminase (380 aa)
   
   
  0.884
IL0547
Acetyltransferase (173 aa)
   
   
  0.865
IL0555
UDP-glucose-glucosyl LPS a 1,2-glucosyltransferase (342 aa)
              0.861
rffG
DTDP-D-glucose 4,6-dehydratase (352 aa)
   
 
  0.843
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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