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IL0558 protein (Idiomarina loihiensis) - STRING interaction network
"IL0558" - annotation not available in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0558annotation not available (373 aa)    
Predicted Functional Partners:
wecC
annotation not available (420 aa)
 
   
  0.706
IL0563
Sugar transferase; Involved in lipopolysaccharide synthesis (183 aa)
   
  0.691
IL0564
annotation not available (351 aa)
 
 
  0.688
kdtA
3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family (661 aa)
   
 
  0.671
IL0703
Glycosyltransferase; Involved in cell wall biogenesis (347 aa)
   
 
  0.656
galE
annotation not available (336 aa)
   
   
  0.650
IL0562
annotation not available (308 aa)
 
 
  0.648
IL0560
annotation not available (345 aa)
 
          0.582
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (489 aa)
   
   
  0.557
IL0569
annotation not available (634 aa)
 
   
  0.495
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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