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IL0560 protein (Idiomarina loihiensis) - STRING interaction network
"IL0560" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0560Hypothetical protein (345 aa)    
Predicted Functional Partners:
galE
UDP-glucose 4-epimerase (336 aa)
              0.689
IL0558
Glycosyltransferase (373 aa)
 
          0.567
IL0540
Multidrug ABC transporter ATPase and permease (598 aa)
   
          0.461
IL0562
Nucleoside-diphosphate-sugar epimerase (308 aa)
              0.449
IL0561
Hypothetical protein (207 aa)
              0.449
cysQ
3’-phosphoadenosine 5’-phosphosulfate 3’-phosphatase (244 aa)
 
          0.420
IL0563
Sugar transferase (183 aa)
              0.418
IL0564
Nucleoside-diphosphate-sugar epimerase (351 aa)
              0.416
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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