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IL0562 protein (Idiomarina loihiensis) - STRING interaction network
"IL0562" - Nucleoside-diphosphate-sugar epimerase in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0562Nucleoside-diphosphate-sugar epimerase (308 aa)    
Predicted Functional Partners:
IL0563
Sugar transferase (183 aa)
   
  0.995
IL0569
Epimerase (634 aa)
 
 
  0.936
IL0561
Hypothetical protein (207 aa)
              0.859
wecC
UDP-N-acetyl-D-mannosaminuronate dehydrogenase (420 aa)
   
  0.854
IL0564
Nucleoside-diphosphate-sugar epimerase (351 aa)
         
  0.848
galE
UDP-glucose 4-epimerase (336 aa)
   
  0.837
galU
UDP-glucose pyrophosphorylase (294 aa)
       
  0.815
ugd
UDP-glucose 6-dehydrogenase (388 aa)
   
 
  0.785
IL0548
Nucleoside-diphosphate sugar epimerase (396 aa)
   
 
  0.783
IL2227
Nucleoside-diphosphate-sugar pyrophosphorylase (225 aa)
   
 
  0.776
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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