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IL0565 protein (Idiomarina loihiensis) - STRING interaction network
"IL0565" - Polysaccharide biosynthesis/export protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0565Polysaccharide biosynthesis/export protein (920 aa)    
Predicted Functional Partners:
IL0539
Chain length determinant protein (336 aa)
 
          0.860
IL1054
Hypothetical protein (436 aa)
 
          0.778
IL0563
Sugar transferase (183 aa)
 
   
  0.767
mrp
Chromosome partitioning ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (327 aa)
   
 
  0.751
IL0568
Hypothetical protein (955 aa)
 
        0.669
IL0562
Nucleoside-diphosphate-sugar epimerase (308 aa)
 
        0.611
arcC
ArsC/ArsR fusion protein (246 aa)
   
   
  0.603
IL0564
Nucleoside-diphosphate-sugar epimerase (351 aa)
   
        0.600
exeA
General secretion pathway ATPase (472 aa)
 
          0.573
IL0569
Epimerase (634 aa)
              0.559
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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