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IL0583 protein (Idiomarina loihiensis) - STRING interaction network
"IL0583" - OmpA family Oar-like outer membrane protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0583OmpA family Oar-like outer membrane protein (1065 aa)    
Predicted Functional Partners:
IL2154
Hypothetical protein (735 aa)
   
          0.741
phoD
Phosphodiesterase/alkaline phosphatase D family enzyme (346 aa)
   
          0.706
IL0657
Zn-ribbon domain-containing protein (302 aa)
   
          0.696
IL0618
Hypothetical protein (523 aa)
   
          0.696
IL1930
Zn-dependent aminopeptidase (776 aa)
   
          0.677
IL0619
Hypothetical protein (901 aa)
   
          0.668
IL2177
Hypothetical protein (785 aa)
   
          0.638
IL0199
Deacylase/carboxypeptidase superfamily protein (887 aa)
   
          0.636
IL2594
Hypothetical protein (781 aa)
   
     
  0.635
IL2008
Porin (392 aa)
   
          0.631
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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