STRINGSTRING
argF protein (Idiomarina loihiensis) - STRING interaction network
"argF" - Ornithine carbamoyltransferase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argFOrnithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (316 aa)    
Predicted Functional Partners:
argG
Argininosuccinate synthase (403 aa)
 
 
  0.999
argH
Argininosuccinate lyase (620 aa)
 
 
  0.999
argB
Acetylglutamate kinase (243 aa)
 
 
  0.999
carB
Carbamoylphosphate synthase large subunit (1074 aa)
 
  0.998
argC
Acetylglutamate semialdehyde dehydrogenase (341 aa)
 
   
  0.997
argE
Acetylornithine deacetylase (386 aa)
   
 
  0.995
carA
Carbamoylphosphate synthase small subunit (381 aa)
 
 
  0.994
argD
Ornithine/acetylornithine aminotransferase (405 aa)
 
  0.986
pyrB
Aspartate carbamoyltransferase (337 aa)
 
 
0.924
IL1527
Aspartate carbamoyltransferase (355 aa)
 
 
0.892
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (7%) [HD]