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aefA protein (Idiomarina loihiensis) - STRING interaction network
"aefA" - Small-conductance mechanosensitive channel in Idiomarina loihiensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aefASmall-conductance mechanosensitive channel (295 aa)    
Predicted Functional Partners:
infB
Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (896 aa)
       
      0.915
dusB
tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (323 aa)
       
      0.841
dusA
tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs (332 aa)
       
      0.778
IL0622
ABC transporter ATPase (537 aa)
              0.644
IL2542
Small-conductance mechanosensitive channel (274 aa)
   
          0.638
tolC
Outer membrane protein (461 aa)
     
      0.548
IL1634
Outer membrane efflux protein (415 aa)
     
      0.548
czcC
Co/Zn/Cd efflux system protein (415 aa)
     
      0.548
IL0275
Na+ ABC transporter permease (401 aa)
 
          0.467
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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