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IL0638 protein (Idiomarina loihiensis) - STRING interaction network
"IL0638" - RadC family protein in Idiomarina loihiensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0638RadC family protein (152 aa)    
Predicted Functional Partners:
alpA
Prophage CP4-57 regulator (68 aa)
 
          0.713
IL0640
Transcriptional regulator (67 aa)
 
          0.653
IL1696
SAM-dependent methyltransferase (256 aa)
 
 
      0.645
polA
DNA polymerase I (921 aa)
     
 
  0.594
fpg
Formamidopyrimidine DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3’- and 5’-phosphates (270 aa)
     
 
  0.464
IL1346
Nucleotide-binding protein implicated in inhibition of septum formation (198 aa)
     
 
  0.461
IL0384
Nucleotide-binding protein implicated in inhibition of septum formation (198 aa)
     
 
  0.461
mreB
Actin-like ATPase (347 aa)
     
      0.456
pheT
Phenylalanyl-tRNA synthetase beta subunit (795 aa)
     
 
  0.453
rne
RNase E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs (980 aa)
     
      0.452
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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