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hsdS protein (Idiomarina loihiensis) - STRING interaction network
"hsdS" - Restriction endonuclease S subunit in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdSRestriction endonuclease S subunit (448 aa)    
Predicted Functional Partners:
hsdM
Type I restriction-modification system methyltransferase subunit (660 aa)
 
 
  0.996
IL0644
Type I site-specific restriction-modification system, R subunit (helicase) (1058 aa)
 
   
  0.987
IL0645
Hypothetical protein (299 aa)
              0.859
polA
DNA polymerase I (921 aa)
       
 
  0.793
intA
Integrase (405 aa)
   
   
  0.522
IL1631
XerC/XerD family integrase/recombinase (186 aa)
   
   
  0.522
intB
Integrase (436 aa)
   
   
  0.522
IL0646
XerC/XerD family integrase/recombinase (186 aa)
   
   
  0.522
IL0685
Fic family protein (351 aa)
 
          0.504
IL1435
Metal-dependent hydrolase (238 aa)
 
          0.502
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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