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IL0677 protein (Idiomarina loihiensis) - STRING interaction network
"IL0677" - Nucleoid-associated protein NdpA in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0677Nucleoid-associated protein NdpA (347 aa)    
Predicted Functional Partners:
IL0678
Alkaline phosphatase (544 aa)
 
     
  0.931
rraB
Hypothetical protein; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome (128 aa)
   
          0.765
IL1452
Hypothetical protein (144 aa)
   
          0.722
IL0223
Hypothetical protein (202 aa)
   
          0.703
proQ
solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities (208 aa)
   
        0.702
ftsL
Cell division protein, FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic (105 aa)
   
          0.671
IL1345
Hypothetical protein (175 aa)
   
          0.635
IL0853
GNAT family acetyltransferase (226 aa)
   
          0.630
rlmM
RNA 2’-O-ribose methyltransferase; Catalyzes the 2’-O-methylation at nucleotide C2498 in 23S rRNA (369 aa)
   
          0.625
metJ
Transcriptional repressor protein MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis (107 aa)
   
          0.613
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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