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IL0685 protein (Idiomarina loihiensis) - STRING interaction network
"IL0685" - Fic family protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0685Fic family protein (351 aa)    
Predicted Functional Partners:
IL0687
Alpha/beta hydrolase (166 aa)
              0.646
IL0686
HIT family hydrolase (134 aa)
              0.646
hsdM
Type I restriction-modification system methyltransferase subunit (660 aa)
 
 
      0.584
IL1435
Metal-dependent hydrolase (238 aa)
 
          0.505
IL0644
Type I site-specific restriction-modification system, R subunit (helicase) (1058 aa)
 
          0.505
hsdS
Restriction endonuclease S subunit (448 aa)
 
          0.504
IL0688
Periplasmic substrate-binding protein (280 aa)
              0.484
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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