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IL0687 protein (Idiomarina loihiensis) - STRING interaction network
"IL0687" - Alpha/beta hydrolase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0687Alpha/beta hydrolase (166 aa)    
Predicted Functional Partners:
IL0686
HIT family hydrolase (134 aa)
 
          0.877
IL0685
Fic family protein (351 aa)
              0.646
IL0688
Periplasmic substrate-binding protein (280 aa)
              0.629
IL0171
Hypothetical protein (401 aa)
   
          0.575
IL1219
Hypothetical protein (152 aa)
   
          0.550
IL1417
Porin (202 aa)
   
          0.521
IL0173
RND superfamily exporter (838 aa)
   
          0.515
IL2392
Secreted protein containing HslJ-like protein (313 aa)
   
          0.495
IL0760
Hypothetical protein (264 aa)
   
          0.482
IL1224
Outer membrane efflux protein (423 aa)
   
          0.462
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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