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acrA protein (Idiomarina loihiensis) - STRING interaction network
"acrA" - Acriflavin resistance protein A in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acrAAcriflavin resistance protein A (384 aa)    
Predicted Functional Partners:
acrB
Acriflavin resistance protein B (1033 aa)
 
  0.999
tolC
Outer membrane protein (461 aa)
 
  0.998
IL2304
RND family efflux transporter (1032 aa)
 
  0.988
IL0602
RND family efflux transporter (1035 aa)
 
  0.943
IL1634
Outer membrane efflux protein (415 aa)
   
  0.888
czcC
Co/Zn/Cd efflux system protein (415 aa)
   
  0.888
IL0467
RND family efflux transporter (1017 aa)
 
  0.861
IL1683
RND family efflux transporter (1058 aa)
 
  0.852
IL1295
RND family efflux transporter (1041 aa)
   
  0.827
acrR
AcrAB operon repressor (204 aa)
   
   
  0.761
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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