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acrB protein (Idiomarina loihiensis) - STRING interaction network
"acrB" - Acriflavin resistance protein B in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acrBAcriflavin resistance protein B (1033 aa)    
Predicted Functional Partners:
acrA
Acriflavin resistance protein A (384 aa)
 
  0.999
tolC
Outer membrane protein (461 aa)
 
  0.985
IL2304
RND family efflux transporter (1032 aa)
   
   
 
0.837
yajC
Preprotein translocase subunit YajC (111 aa)
       
      0.792
IL0466
RND efflux system membrane fusion protein (355 aa)
 
   
  0.784
IL2305
HlyD family secretion protein (351 aa)
 
   
  0.780
IL0601
RND family efflux system membrane fusion protein (347 aa)
 
   
  0.764
IL1294
Hypothetical protein (359 aa)
 
   
  0.739
IL1634
Outer membrane efflux protein (415 aa)
   
  0.655
czcC
Co/Zn/Cd efflux system protein (415 aa)
   
  0.655
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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