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tyrR protein (Idiomarina loihiensis) - STRING interaction network
"tyrR" - Aromatic amino acids metabolism transcriptional regulator in Idiomarina loihiensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrRAromatic amino acids metabolism transcriptional regulator (526 aa)    
Predicted Functional Partners:
rpoN
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (486 aa)
   
     
  0.773
pspA
Phage shock protein A (224 aa)
     
 
  0.669
IL0725
Phenylalanine 4-monooxygenase (264 aa)
 
     
  0.640
IL0724
Pterin-4-alpha-carbinolamine dehydratase (113 aa)
         
  0.614
hmgA
Homogentisate 1,2-dioxygenase (376 aa)
         
  0.533
IL0722
4-hydroxyphenylpyruvate dioxygenase (357 aa)
         
  0.520
fadA
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed (387 aa)
           
  0.514
IL0719
Glutathione S-transferase-like protein (212 aa)
         
  0.512
IL0720
2-keto-4-pentenoate hydratase (341 aa)
              0.510
IL0231
Hypothetical protein (251 aa)
           
  0.507
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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