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IL0728 protein (Idiomarina loihiensis) - STRING interaction network
"IL0728" - ATPase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0728ATPase (457 aa)    
Predicted Functional Partners:
IL0727
Hypothetical protein (329 aa)
 
   
  0.981
pspB
Phage shock protein B (80 aa)
              0.870
pspC
Stress-responsive transcriptional regulator (127 aa)
              0.870
pspA
Phage shock protein A (224 aa)
         
  0.835
IL0223
Hypothetical protein (202 aa)
   
          0.588
IL0726
Methionine gamma-lyase (408 aa)
              0.581
IL1265
Hypothetical protein (251 aa)
   
          0.573
pspF
Transcriptional regulator (358 aa)
              0.551
dppB
Peptide ABC transporter permease (342 aa)
              0.548
dppA
Peptide ABC transporter substrate-binding protein (541 aa)
              0.548
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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