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pspB protein (Idiomarina loihiensis) - STRING interaction network
"pspB" - Phage shock protein B in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pspBPhage shock protein B (80 aa)    
Predicted Functional Partners:
pspA
Phage shock protein A (224 aa)
 
 
  0.997
pspC
Stress-responsive transcriptional regulator (127 aa)
 
   
  0.988
pspF
Transcriptional regulator (358 aa)
 
     
  0.881
IL0727
Hypothetical protein (329 aa)
   
        0.871
IL0728
ATPase (457 aa)
              0.870
IL1447
Hybrid sensor histidine kinase (644 aa)
       
      0.702
syd
Syd; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function (183 aa)
   
          0.650
IL0726
Methionine gamma-lyase (408 aa)
              0.580
dppA
Peptide ABC transporter substrate-binding protein (541 aa)
              0.551
dppB
Peptide ABC transporter permease (342 aa)
              0.550
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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