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truD protein (Idiomarina loihiensis) - STRING interaction network
"truD" - Hypothetical protein in Idiomarina loihiensis
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Predicted Interactions
gene neighborhood
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gene co-occurrence
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textmining
co-expression
protein homology
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truDHypothetical protein; Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs (350 aa)    
Predicted Functional Partners:
surE
SurE; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (250 aa)
   
   
  0.927
pcm
Protein-L-isoaspartate carboxylmethyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins (213 aa)
   
   
  0.925
ispF
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (159 aa)
   
        0.903
IL0747
Hypothetical protein (194 aa)
              0.887
nlpD
Lipoprotein NlpD (305 aa)
              0.887
ispD
4-diphosphocytidyl-2-methyl-D-erithritol synthase; Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) (253 aa)
   
        0.877
ftsB
Septum formation initiator, FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic (93 aa)
   
        0.848
tmcA
P-loop ATPase fused to an acetyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) (612 aa)
   
   
  0.825
truB
tRNA pseudouridine 5S synthase; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (310 aa)
     
 
  0.821
rnt
Ribonuclease T; Trims short 3’ overhangs of a variety of RNA species, leaving a one or two nucleotide 3’ overhang. Responsible for the end-turnover of tRNA- specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis (215 aa)
   
        0.813
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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