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IL0865 protein (Idiomarina loihiensis) - STRING interaction network
"IL0865" - DNA-binding transcriptional activator GcvA in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0865DNA-binding transcriptional activator GcvA (299 aa)    
Predicted Functional Partners:
rlmM
RNA 2’-O-ribose methyltransferase; Catalyzes the 2’-O-methylation at nucleotide C2498 in 23S rRNA (369 aa)
   
        0.891
IL0863
Hypothetical protein (126 aa)
   
        0.888
IL0864
Alpha/beta hydrolase (207 aa)
              0.887
IL1609
LysR family transcriptional regulator (305 aa)
   
        0.740
IL0627
LysR family transcriptional regulator (290 aa)
   
          0.720
IL2095
LysR family transcriptional regulator (280 aa)
   
          0.692
IL0465
LysR family transcriptional regulator (292 aa)
   
          0.667
IL0866
3-ketoacyl-ACP reductase (254 aa)
              0.595
cysB
Transcriptional regulator CysB (324 aa)
 
     
  0.559
mmsB
3-hydroxyisobutyrate dehydrogenase (298 aa)
              0.552
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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