STRINGSTRING
mmsB protein (Idiomarina loihiensis) - STRING interaction network
"mmsB" - 3-hydroxyisobutyrate dehydrogenase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmsB3-hydroxyisobutyrate dehydrogenase (298 aa)    
Predicted Functional Partners:
IL0868
enoyl-CoA hydratase (373 aa)
 
  0.998
mmsA
Methylmalonate-semialdehyde dehydrogenase (499 aa)
 
  0.998
IL1993
NAD-dependent aldehyde dehydrogenase (457 aa)
   
  0.966
fadJ
Multifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities (708 aa)
   
 
  0.960
fadB
Fatty acid oxidation complex alpha subunit; Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate (718 aa)
   
 
  0.960
caiA
acyl-CoA dehydrogenase (385 aa)
 
   
  0.892
IL0866
3-ketoacyl-ACP reductase (254 aa)
 
        0.882
IL1375
2-hydroxy-3-oxopropionate reductase (289 aa)
 
   
0.839
IL1678
Dihydrolipoamide acetyltransferase (525 aa)
 
 
    0.831
prpE
Propionyl-CoA synthetase (623 aa)
   
 
    0.828
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (4%) [HD]