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IL0873 protein (Idiomarina loihiensis) - STRING interaction network
"IL0873" - MerR family transcriptional regulator in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0873MerR family transcriptional regulator (139 aa)    
Predicted Functional Partners:
IL0874
acyl-CoA dehydrogenase (389 aa)
   
   
  0.932
IL0875
3-methylcrotonyl CoA carboxylase subunit beta (535 aa)
   
   
  0.875
IL0876
enoyl-CoA hydratase (261 aa)
 
   
  0.867
gltB
Glutamate synthase subunit alpha (1488 aa)
         
  0.850
IL0877
3-methylcrotonyl-CoA carboxylase subunit alpha (656 aa)
         
  0.830
IL0878
hydroxymethylglutaryl-CoA lyase (299 aa)
         
  0.781
glnA
Glutamine synthetase (469 aa)
   
 
  0.726
merR
Transcriptional regulator MerR (147 aa)
   
          0.714
IL0872
Acetyl-CoA acetyltransferase (393 aa)
         
  0.657
IL0880
Signal protein (739 aa)
   
   
  0.605
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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