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fdx protein (Idiomarina loihiensis) - STRING interaction network
"fdx" - Ferredoxin in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdxFerredoxin (106 aa)    
Predicted Functional Partners:
gltD
Glutamate synthase subunit beta (473 aa)
     
  0.907
IL2040
Cysteine sulfinate desulfinase (385 aa)
   
  0.864
nifS
NifS (705 aa)
   
  0.864
nfuA
DNA uptake protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins (192 aa)
   
 
  0.840
sufA
Fe-S cluster assembly scaffold protein (118 aa)
   
 
  0.744
erpA
HesB/IscA family protein; Required for insertion of 4Fe-4S clusters for at least IspG (116 aa)
   
 
  0.738
dnaK
Molecular chaperone DnaK; Acts as a chaperone (642 aa)
   
 
  0.685
cyoA
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (373 aa)
     
 
  0.640
gpt
Xanthine-guanine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine (161 aa)
              0.611
djlA
Molecular chaperone DnaJ (276 aa)
   
   
  0.563
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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