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IL0896 protein (Idiomarina loihiensis) - STRING interaction network
"IL0896" - Hypothetical protein in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
IL0896Hypothetical protein (125 aa)    
Predicted Functional Partners:
IL0897
Oligoketide cyclase/lipid transport protein (148 aa)
   
   
  0.891
IL0895
Phosphohistidine phosphatase SixA (160 aa)
              0.859
rnfB
Electron transport complex protein RnfB; Part of a membrane complex involved in electron transport (193 aa)
 
     
  0.856
rnfG
NADH-ubiquinone oxidoreductase subunit RnfG; Part of a membrane complex involved in electron transport (213 aa)
 
     
  0.791
smpB
SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a ’tag peptide’, a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] (159 aa)
   
        0.759
rnfD
NADH-ubiquinone oxidoreductase subunit RnfD; Part of a membrane complex involved in electron transport (350 aa)
 
     
  0.687
rnfC
Electron transport complex protein RnfC; Part of a membrane complex involved in electron transport (556 aa)
 
     
  0.635
rnfE
Electron transport complex protein RsxE; Part of a membrane complex involved in electron transport (226 aa)
 
     
  0.599
rseB
Negative regulator of sigma E activity (321 aa)
   
          0.548
rnfA
Na(+)-translocating NADH-quinone reductase subunit E; Part of a membrane complex involved in electron transport (193 aa)
 
     
  0.547
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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