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IL0903 protein (Idiomarina loihiensis) - STRING interaction network
"IL0903" - Flp pilus assembly protein CpaF in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0903Flp pilus assembly protein CpaF (407 aa)    
Predicted Functional Partners:
IL0904
Flp pilus assembly protein CpaC (404 aa)
 
   
  0.979
tadB
Flp pilus assembly protein TadB (233 aa)
 
   
  0.949
tadC
Flp pilus assembly protein TadC (237 aa)
 
   
  0.936
IL0905
Flp pilus assembly protein CpaB (235 aa)
 
          0.882
IL0910
Flp/Fap pilin-like protein (92 aa)
 
          0.770
IL0909
Hypothetical protein (407 aa)
 
          0.736
IL0906
Hypothetical protein (168 aa)
              0.506
topA
Topoisomerase IA; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoi [...] (872 aa)
            0.445
IL0900
Hypothetical protein (130 aa)
              0.426
IL0899
Hypothetical protein (170 aa)
              0.426
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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