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rlmH protein (Idiomarina loihiensis) - STRING interaction network
"rlmH" - rRNA large subunit methyltransferase in Idiomarina loihiensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rlmHrRNA large subunit methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (156 aa)    
Predicted Functional Partners:
rsfS
Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (105 aa)
   
   
  0.946
mrdA
Cell division protein FtsI (631 aa)
   
        0.923
mrdB
Cell division membrane protein (372 aa)
   
        0.905
rlpA
Rare lipoprotein A (275 aa)
   
        0.872
mltB
Membrane-bound lytic murein transglycosylase B (323 aa)
              0.870
nadD
Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (209 aa)
   
   
  0.796
dacA
D-alanyl-D-alanine carboxypeptidase (385 aa)
 
   
  0.781
holA
DNA polymerase III subunit delta (360 aa)
   
        0.779
lptE
Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (164 aa)
              0.770
leuS
Leucyl-tRNA synthetase (858 aa)
              0.770
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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