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mrdB protein (Idiomarina loihiensis) - STRING interaction network
"mrdB" - Cell division membrane protein in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrdBCell division membrane protein (372 aa)    
Predicted Functional Partners:
mrdA
Cell division protein FtsI (631 aa)
  0.999
ftsI
Cell division protein FtsI (577 aa)
  0.991
mreB
Actin-like ATPase (347 aa)
 
 
  0.977
mraY
UDP-N-acetylmuramyl pentapeptide phosphotransferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (360 aa)
  0.959
mreC
Rod shape-determining protein; Involved in formation and maintenance of cell shape (285 aa)
 
 
  0.952
murG
UDP-N-acetylglucosamine-LPS N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (362 aa)
  0.927
murE
UDP-N-acetylmuramyl tripeptide synthase (487 aa)
 
  0.917
murC
UDP-N-acetylmuramate-alanine ligase; Cell wall formation (490 aa)
 
  0.910
rlmH
rRNA large subunit methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (156 aa)
   
        0.905
rsfS
Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (105 aa)
   
        0.905
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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