STRINGSTRING
carA protein (Idiomarina loihiensis) - STRING interaction network
"carA" - Carbamoylphosphate synthase small subunit in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
carACarbamoylphosphate synthase small subunit (381 aa)    
Predicted Functional Partners:
carB
Carbamoylphosphate synthase large subunit (1074 aa)
  0.999
pyrB
Aspartate carbamoyltransferase (337 aa)
  0.999
IL1527
Aspartate carbamoyltransferase (355 aa)
 
  0.999
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (316 aa)
 
 
  0.994
gltB
Glutamate synthase subunit alpha (1488 aa)
   
 
  0.981
argG
Argininosuccinate synthase (403 aa)
   
 
  0.966
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine (505 aa)
   
 
  0.964
glmS
Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (610 aa)
   
  0.956
pyrF
Orotidine-5’-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP) (231 aa)
 
 
  0.954
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (525 aa)
   
   
  0.943
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (9%) [HD]