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STRINGSTRING
IL1009 protein (Idiomarina loihiensis) - STRING interaction network
"IL1009" - annotation not available in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1009annotation not available (244 aa)    
Predicted Functional Partners:
IL0909
Uncharacterized secreted protein; Possible component of Flp-like pilus (407 aa)
 
          0.797
IL0910
annotation not available (92 aa)
 
          0.771
IL2429
annotation not available (428 aa)
   
        0.679
IL1877
Uncharacterized conserved membrane protein, smp family; Probably affects hemolysin expression (195 aa)
   
          0.646
IL1521
annotation not available (365 aa)
   
          0.633
IL1285
annotation not available (581 aa)
   
          0.598
IL2428
annotation not available (558 aa)
   
          0.591
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (872 aa)
              0.558
IL0905
annotation not available (235 aa)
 
        0.546
IL2353
annotation not available (65 aa)
   
          0.529
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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