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truA protein (Idiomarina loihiensis) - STRING interaction network
"truA" - tRNA pseudouridine synthase A in Idiomarina loihiensis
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (261 aa)    
Predicted Functional Partners:
truB
tRNA pseudouridine 5S synthase; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (310 aa)
 
  0.973
folC
Folylpolyglutamate synthase (430 aa)
   
   
  0.906
sfhB
Pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil (322 aa)
 
   
  0.891
fimV
Tfp pilus assembly protein FimV (782 aa)
              0.873
IL1348
Pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil (315 aa)
 
   
  0.843
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (288 aa)
 
   
  0.790
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (338 aa)
   
   
  0.786
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (226 aa)
 
 
  0.761
accD
AcetylCoA carboxylase, carboxytransferase component subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA (292 aa)
   
   
  0.759
IL2224
Pseudouridylate synthase (218 aa)
 
   
  0.750
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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