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fimV protein (Idiomarina loihiensis) - STRING interaction network
"fimV" - Tfp pilus assembly protein FimV in Idiomarina loihiensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fimVTfp pilus assembly protein FimV (782 aa)    
Predicted Functional Partners:
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (261 aa)
              0.873
dedD
Hypothetical protein (181 aa)
 
          0.786
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (338 aa)
              0.751
accD
AcetylCoA carboxylase, carboxytransferase component subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA (292 aa)
              0.730
folC
Folylpolyglutamate synthase (430 aa)
              0.730
IL1154
Hypothetical protein (387 aa)
   
          0.692
IL1875
Hypothetical protein (834 aa)
   
          0.688
IL1072
Glycosyltransferase (637 aa)
   
          0.668
exeB
General secretion pathway protein B (236 aa)
   
          0.656
damX
Hypothetical protein (519 aa)
   
          0.649
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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