STRINGSTRING
IL1039 protein (Idiomarina loihiensis) - STRING interaction network
"IL1039" - Alpha/beta hydrolase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1039Alpha/beta hydrolase (821 aa)    
Predicted Functional Partners:
IL0479
Hypothetical protein (124 aa)
   
          0.739
pulN
Type II secretory pathway, component PulN (248 aa)
   
          0.698
IL2268
Hypothetical protein (229 aa)
   
          0.692
IL2345
Hypothetical protein (167 aa)
   
          0.685
tolA
TolA-like protein (267 aa)
   
          0.677
IL1269
Zn-ribbon protein (109 aa)
   
          0.656
sohB
Peptidase S49 (332 aa)
              0.654
IL0859
SmpA /OmlA family lipoprotein (128 aa)
   
          0.651
IL1854
Hypothetical protein (432 aa)
   
        0.649
IL1256
Hypothetical protein (294 aa)
   
          0.626
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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