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IL1041 protein (Idiomarina loihiensis) - STRING interaction network
"IL1041" - BNR repeat-containing protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1041BNR repeat-containing protein (356 aa)    
Predicted Functional Partners:
IL2143
Hypothetical protein (215 aa)
   
          0.699
IL1495
Hypothetical protein (231 aa)
   
          0.668
IL1040
Short chain dehydrogenase (250 aa)
              0.621
IL2328
Dipeptidyl aminopeptidase (769 aa)
   
          0.563
IL0311
Multidrug ABC transporter permease (245 aa)
   
 
      0.551
IL1521
Hypothetical protein (365 aa)
   
          0.498
IL0297
Metal-dependent hydrolase (453 aa)
   
          0.480
rpmE
Ribosomal protein L31; Binds the 23S rRNA (72 aa)
     
        0.479
IL0678
Alkaline phosphatase (544 aa)
   
          0.446
IL1716
Amidohydrolase (433 aa)
   
          0.445
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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