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nifS protein (Idiomarina loihiensis) - STRING interaction network
"nifS" - NifS in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifSNifS (705 aa)    
Predicted Functional Partners:
nfuA
DNA uptake protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins (192 aa)
   
  0.956
thiI
Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS (483 aa)
 
  0.895
tusA
Redox protein, regulator of disulfide bond formation; Could be part of a sulfur-relay system (79 aa)
     
 
  0.874
IL1365
(Fe-S)-binding protein (86 aa)
   
  0.864
fdx
Ferredoxin (106 aa)
   
  0.864
dnaK
Molecular chaperone DnaK; Acts as a chaperone (642 aa)
 
 
  0.839
IL2041
YjeB/RRF2 family transcriptional regulator (159 aa)
 
 
  0.834
thiF
Thiamine biosynthesis protein ThiF (252 aa)
 
  0.829
csdA
Selenocysteine lyase/Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (405 aa)
 
 
0.819
IL0154
Cysteine desulfurase (478 aa)
       
  0.813
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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