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bolA protein (Idiomarina loihiensis) - STRING interaction network
"bolA" - BolA family transcriptional regulator in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bolABolA family transcriptional regulator (106 aa)    
Predicted Functional Partners:
IL1804
Glutaredoxin-like protein (112 aa)
 
 
  0.923
rpoS
DNA-directed RNA polymerase sigma 38 subunit (322 aa)
           
  0.645
fabV
trans-2-enoyl-CoA reductase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP) (392 aa)
              0.623
IL1053
Hypothetical protein (158 aa)
              0.569
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1295 aa)
              0.518
IL1001
Peptidyl-prolyl isomerase (622 aa)
 
      0.468
IL1054
Hypothetical protein (436 aa)
              0.431
IL1525
Bifunctional methionine sulfoxide reductase A/B (370 aa)
              0.422
dps_2
Ferritin (158 aa)
     
        0.412
IL1498
Ferritin (113 aa)
     
        0.412
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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