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fbpB protein (Idiomarina loihiensis) - STRING interaction network
"fbpB" - Iron ABC transporter permease in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbpBIron ABC transporter permease (542 aa)    
Predicted Functional Partners:
fbpA
Iron ABC transporter substrate-binding protein (341 aa)
 
 
  0.999
fbpC
Iron ABC transporter ATPase (352 aa)
 
  0.998
IL1157
ABC transporter ATPase (222 aa)
 
   
    0.738
hmuU
Hemin ABC transporter permease (338 aa)
     
 
  0.705
IL1062
Mg/Co transporter (313 aa)
              0.638
IL1058
Na+/H+ antiporter (609 aa)
              0.539
prpE
Propionyl-CoA synthetase (623 aa)
              0.451
thiE
Thiamine monophosphate synthase (504 aa)
           
  0.422
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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