STRINGSTRING
bfr protein (Idiomarina loihiensis) - STRING interaction network
"bfr" - Bacterioferritin (cytochrome b1) in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bfrBacterioferritin (cytochrome b1); Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex (158 aa)    
Predicted Functional Partners:
IL1067
Bacterioferritin (cytochrome b1); Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex (155 aa)
 
 
0.980
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (364 aa)
     
 
  0.906
bfd
Bacterioferritin-associated ferredoxin (74 aa)
              0.761
kdpE
Response regulator (237 aa)
           
  0.608
IL1064
Ca2+/Na+ antiporter (325 aa)
              0.576
hemE
Uroporphyrinogen-III decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (358 aa)
           
  0.553
norR
Nitric oxide reductase regulator (514 aa)
           
  0.517
prpE
Propionyl-CoA synthetase (623 aa)
              0.498
sodB
Superoxide dismutase, Fe dependent; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (193 aa)
         
  0.417
sodA
Superoxide dismutase, Mn dependent; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (202 aa)
         
  0.417
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (7%) [HD]