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gltD protein (Idiomarina loihiensis) - STRING interaction network
"gltD" - Glutamate synthase subunit beta in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltDGlutamate synthase subunit beta (473 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase subunit alpha (1488 aa)
  0.999
glnA
Glutamine synthetase (469 aa)
   
 
  0.981
IL0861
Isocitrate dehydrogenase (334 aa)
     
 
  0.975
glnE
Glutamine synthetase; Adenylation and deadenylation of glutamate--ammonia ligase (948 aa)
     
 
  0.973
gdhA
Glutamate dehydrogenase (450 aa)
   
  0.951
IL1433
Monomeric isocitrate dehydrogenase (741 aa)
   
 
    0.947
IL2578
Glutamate synthase (503 aa)
 
  0.944
carB
Carbamoylphosphate synthase large subunit (1074 aa)
   
 
  0.920
carA
Carbamoylphosphate synthase small subunit (381 aa)
   
 
  0.920
glmS
Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (610 aa)
   
  0.914
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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